Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 NME6-208ENST00000435684 599 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 RPL3P5-201ENST00000441645 1232 ntBASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 AC006529.1-201ENST00000459978 637 ntBASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 AC023906.1-201ENST00000486386 453 ntBASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 RN7SL564P-201ENST00000496309 250 ntBASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 AC095040.1-201ENST00000513286 675 ntBASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 RN7SL121P-201ENST00000584223 273 ntBASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 AC009093.10-201ENST00000641956 1442 ntBASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PTCH2Q9Y6C5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 AC087481.3-201ENST00000602886 1894 ntBASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 RNVU1-8-201ENST00000364272 125 ntBASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 ST13P19-201ENST00000442505 1124 ntBASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 AC092862.1-201ENST00000541534 533 ntBASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 FUCA1P1-201ENST00000374476 1351 ntBASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCH2Q9Y6C5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AL590440.2-201ENST00000641973 1595 ntBASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 AP000845.1-201ENST00000581677 2131 ntBASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTCH2Q9Y6C5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms