Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 AC087499.5-201ENST00000452760 1342 ntBASIC18.17■□□□□ 0.5
UPF2Q9HAU5 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 SALL4P5-201ENST00000419001 1760 ntBASIC18.17■□□□□ 0.5
UPF2Q9HAU5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 AL136172.1-201ENST00000598590 1394 ntBASIC18.17■□□□□ 0.5
UPF2Q9HAU5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.17■□□□□ 0.5
UPF2Q9HAU5 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 MEIS3P1-201ENST00000495167 958 ntBASIC18.16■□□□□ 0.5
UPF2Q9HAU5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 ZNF890P-202ENST00000530367 1156 ntBASIC18.16■□□□□ 0.5
UPF2Q9HAU5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.16■□□□□ 0.5
UPF2Q9HAU5 AC023794.5-201ENST00000564380 2157 ntBASIC18.15■□□□□ 0.5
UPF2Q9HAU5 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 GALC-206ENST00000544807 2528 ntTSL 2 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms