Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AC026271.1-201ENST00000447794 1348 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AC006987.1-201ENST00000413610 527 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 PHBP10-201ENST00000416467 784 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AC010086.2-201ENST00000428616 226 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 IFNWP19-201ENST00000438727 566 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 TRAIP-202ENST00000469027 1145 ntTSL 5 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AC098591.1-202ENST00000507914 937 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AC092284.1-201ENST00000511386 1289 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 CCND3P2-201ENST00000579393 537 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AC063977.2-201ENST00000601996 421 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AL356740.1-201ENST00000602192 1297 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 MIR4726-201ENST00000615971 58 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 PKD1P5-201ENST00000532415 10291 ntBASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 SFPQP1-201ENST00000446621 1786 ntBASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 LINC01101-201ENST00000622953 1884 ntBASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 IMPDH1P5-201ENST00000439688 1540 ntBASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 SERPINB8P1-201ENST00000401898 377 ntBASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 AL356583.3-201ENST00000412354 417 ntBASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 RN7SL47P-201ENST00000488710 299 ntBASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 AC112250.1-201ENST00000504640 745 ntBASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 PTS-204ENST00000525803 625 ntTSL 3 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 AC106872.9-201ENST00000512437 1393 ntBASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 FZD10-202ENST00000539839 3282 ntBASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.42□□□□□ -0.1
COL25A1Q9BXS0 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL25A1Q9BXS0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
COL25A1Q9BXS0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL25A1Q9BXS0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL25A1Q9BXS0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
COL25A1Q9BXS0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
COL25A1Q9BXS0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms