Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.82□□□□□ -0.04
NOTCH4Q99466 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NOTCH4Q99466 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NOTCH4Q99466 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.82□□□□□ -0.04
NOTCH4Q99466 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NOTCH4Q99466 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NOTCH4Q99466 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NOTCH4Q99466 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NOTCH4Q99466 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NOTCH4Q99466 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NOTCH4Q99466 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NOTCH4Q99466 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.82□□□□□ -0.04
NOTCH4Q99466 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NOTCH4Q99466 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.82□□□□□ -0.04
NOTCH4Q99466 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.82□□□□□ -0.04
NOTCH4Q99466 SNORD3B-1-201ENST00000577988 758 ntBASIC14.82□□□□□ -0.04
NOTCH4Q99466 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
NOTCH4Q99466 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.82□□□□□ -0.04
NOTCH4Q99466 AC138466.4-201ENST00000623965 852 ntBASIC14.82□□□□□ -0.04
NOTCH4Q99466 MTHFR-210ENST00000641407 2387 ntBASIC14.82□□□□□ -0.04
NOTCH4Q99466 KRT8P43-201ENST00000406052 1458 ntBASIC14.81□□□□□ -0.04
NOTCH4Q99466 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 EEF1DP2-201ENST00000433698 843 ntBASIC14.81□□□□□ -0.04
NOTCH4Q99466 AC098934.1-203ENST00000442868 1262 ntBASIC14.81□□□□□ -0.04
NOTCH4Q99466 AC093909.3-201ENST00000504783 336 ntBASIC14.81□□□□□ -0.04
NOTCH4Q99466 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 AC011247.3-201ENST00000603297 438 ntBASIC14.81□□□□□ -0.04
NOTCH4Q99466 AC073592.2-201ENST00000623062 780 ntBASIC14.81□□□□□ -0.04
NOTCH4Q99466 AC002472.4-201ENST00000641915 272 ntBASIC14.81□□□□□ -0.04
NOTCH4Q99466 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NOTCH4Q99466 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.81□□□□□ -0.04
NOTCH4Q99466 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH4Q99466 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH4Q99466 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH4Q99466 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 GCSHP3-201ENST00000431120 391 ntBASIC14.8□□□□□ -0.04
NOTCH4Q99466 AC093826.1-201ENST00000508655 993 ntBASIC14.8□□□□□ -0.04
NOTCH4Q99466 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 AC244250.3-201ENST00000620749 366 ntBASIC14.8□□□□□ -0.04
NOTCH4Q99466 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 AC092384.3-202ENST00000564646 2873 ntBASIC14.8□□□□□ -0.04
NOTCH4Q99466 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH4Q99466 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 LINC00115-201ENST00000473798 1317 ntBASIC14.8□□□□□ -0.04
NOTCH4Q99466 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH4Q99466 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH4Q99466 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH4Q99466 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.8□□□□□ -0.04
NOTCH4Q99466 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
NOTCH4Q99466 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH4Q99466 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms