Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 GOLGA8UP-201ENST00000527159 1755 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 AP005117.1-202ENST00000581724 1908 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 HNRNPA1P21-201ENST00000424115 961 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 FAM86JP-202ENST00000484500 988 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 AL009176.1-201ENST00000607876 650 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 AC015688.4-201ENST00000580780 1647 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 MPV17-209ENST00000405983 859 ntTSL 5 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 PHBP10-201ENST00000416467 784 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 POLR2LP1-206ENST00000444785 187 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 AC233724.9-201ENST00000511694 407 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 URB1-AS1-201ENST00000534991 831 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 AC140658.4-201ENST00000561990 352 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 AC026691.1-201ENST00000602502 2017 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 RNA5SP491-201ENST00000362936 118 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 AC138627.1-201ENST00000641127 1257 ntBASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
ALMS1Q8TCU4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 RHOC-205ENST00000369636 786 ntTSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 RPL10-203ENST00000406022 748 ntTSL 3 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 FAM187B2P-201ENST00000577135 713 ntBASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 RN7SL440P-201ENST00000577855 343 ntBASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 AC015909.5-201ENST00000624336 2266 ntBASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms