Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CICP11-201ENST00000434745 2827 ntBASIC13.01□□□□□ -0.33
C11orf88Q6PI97 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
C11orf88Q6PI97 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
C11orf88Q6PI97 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13□□□□□ -0.33
C11orf88Q6PI97 AC145098.2-201ENST00000623593 3026 ntBASIC13□□□□□ -0.33
C11orf88Q6PI97 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
C11orf88Q6PI97 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13□□□□□ -0.33
C11orf88Q6PI97 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13□□□□□ -0.33
C11orf88Q6PI97 AP3S2-216ENST00000617003 1561 ntBASIC13□□□□□ -0.33
C11orf88Q6PI97 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13□□□□□ -0.33
C11orf88Q6PI97 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13□□□□□ -0.33
C11orf88Q6PI97 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13□□□□□ -0.33
C11orf88Q6PI97 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13□□□□□ -0.33
C11orf88Q6PI97 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13□□□□□ -0.33
C11orf88Q6PI97 HLA-V-204ENST00000476601 1289 ntBASIC13□□□□□ -0.33
C11orf88Q6PI97 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13□□□□□ -0.33
C11orf88Q6PI97 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13□□□□□ -0.33
C11orf88Q6PI97 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13□□□□□ -0.33
C11orf88Q6PI97 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13□□□□□ -0.33
C11orf88Q6PI97 AL390754.1-201ENST00000619088 582 ntBASIC13□□□□□ -0.33
C11orf88Q6PI97 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13□□□□□ -0.33
C11orf88Q6PI97 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13□□□□□ -0.33
C11orf88Q6PI97 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
C11orf88Q6PI97 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf88Q6PI97 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 AC097493.3-201ENST00000509725 367 ntBASIC12.99□□□□□ -0.33
C11orf88Q6PI97 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.99□□□□□ -0.33
C11orf88Q6PI97 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms