Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 CAP2P1-201ENST00000557743 1390 ntBASIC17.13■□□□□ 0.33
CERKLQ49MI3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 RNA5SP359-201ENST00000364838 113 ntBASIC17.12■□□□□ 0.33
CERKLQ49MI3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 RPL8P2-201ENST00000430538 502 ntBASIC17.12■□□□□ 0.33
CERKLQ49MI3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 MPRIPP1-201ENST00000452433 1089 ntBASIC17.12■□□□□ 0.33
CERKLQ49MI3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CERKLQ49MI3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.12■□□□□ 0.33
CERKLQ49MI3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 BANF1P3-201ENST00000412556 261 ntBASIC17.11■□□□□ 0.33
CERKLQ49MI3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 FGFR3P1-201ENST00000449999 601 ntBASIC17.11■□□□□ 0.33
CERKLQ49MI3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 AC027237.1-201ENST00000560942 655 ntBASIC17.11■□□□□ 0.33
CERKLQ49MI3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.11■□□□□ 0.33
CERKLQ49MI3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CERKLQ49MI3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CERKLQ49MI3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms