Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.39□□□□□ -0.27
PPP1R3DO95685 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PPP1R3DO95685 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP1R3DO95685 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.39□□□□□ -0.27
PPP1R3DO95685 AC138969.2-201ENST00000532739 9932 ntBASIC13.39□□□□□ -0.27
PPP1R3DO95685 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PPP1R3DO95685 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PPP1R3DO95685 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PPP1R3DO95685 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP1R3DO95685 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP1R3DO95685 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PPP1R3DO95685 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP1R3DO95685 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PPP1R3DO95685 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.39□□□□□ -0.27
PPP1R3DO95685 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PPP1R3DO95685 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
PPP1R3DO95685 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.39□□□□□ -0.27
PPP1R3DO95685 MRPL37P1-201ENST00000592451 1337 ntBASIC13.39□□□□□ -0.27
PPP1R3DO95685 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 AC020910.6-201ENST00000623084 1459 ntBASIC13.38□□□□□ -0.27
PPP1R3DO95685 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 SPTLC1P1-201ENST00000447199 261 ntBASIC13.38□□□□□ -0.27
PPP1R3DO95685 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 AL132655.2-201ENST00000596276 594 ntBASIC13.38□□□□□ -0.27
PPP1R3DO95685 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 AC009118.2-201ENST00000613275 655 ntBASIC13.38□□□□□ -0.27
PPP1R3DO95685 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 MBLAC2-202ENST00000514906 1936 ntBASIC13.38□□□□□ -0.27
PPP1R3DO95685 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 AC079781.5-202ENST00000641784 3743 ntBASIC13.38□□□□□ -0.27
PPP1R3DO95685 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP1R3DO95685 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP1R3DO95685 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.37□□□□□ -0.27
PPP1R3DO95685 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP1R3DO95685 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.37□□□□□ -0.27
PPP1R3DO95685 MYCLP2-201ENST00000449268 967 ntBASIC13.37□□□□□ -0.27
PPP1R3DO95685 KRT18P25-201ENST00000508931 1278 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms