Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SLC28A1O00337 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC28A1O00337 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SLC28A1O00337 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC28A1O00337 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.24□□□□□ -0.13
SLC28A1O00337 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SLC28A1O00337 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC28A1O00337 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC28A1O00337 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC28A1O00337 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SLC28A1O00337 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SLC28A1O00337 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SLC28A1O00337 MBLAC2-202ENST00000514906 1936 ntBASIC14.23□□□□□ -0.13
SLC28A1O00337 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC28A1O00337 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 AC139712.1-201ENST00000378256 1875 ntBASIC14.23□□□□□ -0.13
SLC28A1O00337 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SLC28A1O00337 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC28A1O00337 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SLC28A1O00337 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC28A1O00337 POM121L8P-201ENST00000417732 1281 ntBASIC14.23□□□□□ -0.13
SLC28A1O00337 POM121L9P-203ENST00000441984 1285 ntBASIC14.23□□□□□ -0.13
SLC28A1O00337 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SLC28A1O00337 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.23□□□□□ -0.13
SLC28A1O00337 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.23□□□□□ -0.13
SLC28A1O00337 FTLP10-202ENST00000505798 471 ntBASIC14.23□□□□□ -0.13
SLC28A1O00337 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
SLC28A1O00337 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.23□□□□□ -0.13
SLC28A1O00337 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.23□□□□□ -0.13
SLC28A1O00337 ENPP7P14-201ENST00000621765 1040 ntBASIC14.23□□□□□ -0.13
SLC28A1O00337 AP001002.3-201ENST00000623482 206 ntBASIC14.23□□□□□ -0.13
SLC28A1O00337 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.23□□□□□ -0.13
SLC28A1O00337 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SLC28A1O00337 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SLC28A1O00337 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SLC28A1O00337 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC28A1O00337 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC28A1O00337 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC28A1O00337 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 AC011498.7-201ENST00000624986 2027 ntBASIC14.22□□□□□ -0.13
SLC28A1O00337 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 KHSRPP1-201ENST00000427983 1768 ntBASIC14.22□□□□□ -0.13
SLC28A1O00337 FKBP4P6-201ENST00000457486 1332 ntBASIC14.22□□□□□ -0.13
SLC28A1O00337 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SLC28A1O00337 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC28A1O00337 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SLC28A1O00337 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms