Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 MIR1247-201ENST00000408206 136 ntBASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 AC099548.2-209ENST00000480264 625 ntBASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 SCARNA21-201ENST00000517026 139 ntBASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 AC068587.8-201ENST00000641239 219 ntBASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 AC020907.1-201ENST00000616460 1350 ntBASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 CYP4F23P-201ENST00000593402 1579 ntBASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YJEFN3A6XGL0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 GPAA1P2-201ENST00000417923 928 ntBASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 RBM8B-201ENST00000555532 525 ntBASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 RN7SL163P-201ENST00000583100 276 ntBASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 AC008805.1-201ENST00000590892 364 ntBASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YJEFN3A6XGL0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 FAM90A7P-201ENST00000382628 1395 ntBASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 FAM90A23P-201ENST00000400136 1395 ntBASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms