Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 EEF1DP1-201ENST00000585891 896 ntBASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 AL136301.1-201ENST00000615830 422 ntBASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 AC244157.2-201ENST00000616239 1006 ntBASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB42Q8N4Z0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
RAB42Q8N4Z0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 INE2-201ENST00000630399 1874 ntBASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB42Q8N4Z0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB42Q8N4Z0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms