Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 AC091951.1-201ENST00000512854 2465 ntBASIC15.71■□□□□ 0.1
RNF135Q8IUD6 AC112693.3-201ENST00000624819 1983 ntBASIC15.71■□□□□ 0.1
RNF135Q8IUD6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RNF135Q8IUD6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RNF135Q8IUD6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RNF135Q8IUD6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RNF135Q8IUD6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.71■□□□□ 0.1
RNF135Q8IUD6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RNF135Q8IUD6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 RPS9P1-201ENST00000419943 583 ntBASIC15.7■□□□□ 0.1
RNF135Q8IUD6 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 AL157792.1-201ENST00000488281 530 ntBASIC15.7■□□□□ 0.1
RNF135Q8IUD6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 YRDCP1-201ENST00000621419 643 ntBASIC15.7■□□□□ 0.1
RNF135Q8IUD6 NAP1L6-202ENST00000641404 1222 ntBASIC15.7■□□□□ 0.1
RNF135Q8IUD6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RNF135Q8IUD6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 KRT8P14-201ENST00000414254 1442 ntBASIC15.69■□□□□ 0.1
RNF135Q8IUD6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 EIF3FP3-201ENST00000434851 1086 ntBASIC15.69■□□□□ 0.1
RNF135Q8IUD6 AC073150.1-201ENST00000450406 1084 ntBASIC15.69■□□□□ 0.1
RNF135Q8IUD6 AC079112.1-201ENST00000454972 939 ntBASIC15.69■□□□□ 0.1
RNF135Q8IUD6 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 AL160314.3-201ENST00000556041 767 ntBASIC15.69■□□□□ 0.1
RNF135Q8IUD6 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 DNM1P30-201ENST00000563586 452 ntBASIC15.69■□□□□ 0.1
RNF135Q8IUD6 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF135Q8IUD6 AC074138.1-201ENST00000611182 1303 ntBASIC15.68■□□□□ 0.1
RNF135Q8IUD6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms