Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB43Q86YS6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB43Q86YS6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 COX5BP1-201ENST00000507622 393 ntBASIC14.21□□□□□ -0.13
RAB43Q86YS6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 C2orf69P2-201ENST00000562032 1123 ntBASIC14.21□□□□□ -0.13
RAB43Q86YS6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB43Q86YS6 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB43Q86YS6 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
RAB43Q86YS6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB43Q86YS6 AC006504.5-208ENST00000588784 2401 ntBASIC14.21□□□□□ -0.14
RAB43Q86YS6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB43Q86YS6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
RAB43Q86YS6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB43Q86YS6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.21□□□□□ -0.14
RAB43Q86YS6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
RAB43Q86YS6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
RAB43Q86YS6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
RAB43Q86YS6 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RAB43Q86YS6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB43Q86YS6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB43Q86YS6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RAB43Q86YS6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB43Q86YS6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB43Q86YS6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB43Q86YS6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RAB43Q86YS6 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB43Q86YS6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB43Q86YS6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB43Q86YS6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB43Q86YS6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms