Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.68□□□□□ -0.22
H3F3CQ6NXT2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 AC007292.2-201ENST00000593524 1812 ntBASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 AC244394.1-201ENST00000435000 1665 ntBASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 CICP12-201ENST00000455801 843 ntBASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 AL136295.7-201ENST00000619226 1200 ntBASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
H3F3CQ6NXT2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 AL008718.2-201ENST00000609206 1313 ntBASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 LINC01101-201ENST00000622953 1884 ntBASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 SLC25A24P2-201ENST00000415059 510 ntBASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 KLF2P1-201ENST00000447438 1042 ntBASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 RPL18P13-201ENST00000478088 569 ntBASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 HLA-J-204ENST00000495278 958 ntBASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.66□□□□□ -0.22
H3F3CQ6NXT2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms