Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.67■□□□□ 0.42
RFX7Q2KHR2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 AC012441.2-201ENST00000444843 739 ntBASIC17.66■□□□□ 0.42
RFX7Q2KHR2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 MIR4754-201ENST00000582477 89 ntBASIC17.66■□□□□ 0.42
RFX7Q2KHR2 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 MEG3_2.1-201ENST00000611456 105 ntBASIC17.66■□□□□ 0.42
RFX7Q2KHR2 AC128714.1-201ENST00000637035 887 ntBASIC17.66■□□□□ 0.42
RFX7Q2KHR2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.66■□□□□ 0.42
RFX7Q2KHR2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 AC006122.1-201ENST00000493323 440 ntBASIC17.66■□□□□ 0.42
RFX7Q2KHR2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 SCARNA21-201ENST00000517026 139 ntBASIC17.66■□□□□ 0.42
RFX7Q2KHR2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 AC005586.2-201ENST00000563946 837 ntBASIC17.66■□□□□ 0.42
RFX7Q2KHR2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX7Q2KHR2 AC011498.7-201ENST00000624986 2027 ntBASIC17.66■□□□□ 0.42
RFX7Q2KHR2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX7Q2KHR2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms