Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRPHP41219 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.67■□□□□ 0.26
PRPHP41219 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PRPHP41219 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.66■□□□□ 0.26
PRPHP41219 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.66■□□□□ 0.26
PRPHP41219 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.66■□□□□ 0.26
PRPHP41219 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PRPHP41219 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.66■□□□□ 0.26
PRPHP41219 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.66■□□□□ 0.26
PRPHP41219 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PRPHP41219 HOMER2P2-201ENST00000451621 847 ntBASIC16.66■□□□□ 0.26
PRPHP41219 CICP12-201ENST00000455801 843 ntBASIC16.66■□□□□ 0.26
PRPHP41219 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.66■□□□□ 0.26
PRPHP41219 SNX29P1-201ENST00000548357 1007 ntBASIC16.66■□□□□ 0.26
PRPHP41219 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.66■□□□□ 0.26
PRPHP41219 SORD2P-201ENST00000558556 1069 ntBASIC16.66■□□□□ 0.26
PRPHP41219 AC009093.10-201ENST00000641956 1442 ntBASIC16.66■□□□□ 0.26
PRPHP41219 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
PRPHP41219 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.66■□□□□ 0.26
PRPHP41219 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 CICP4-201ENST00000447359 2812 ntBASIC16.66■□□□□ 0.26
PRPHP41219 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRPHP41219 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 AL122018.1-201ENST00000446607 2310 ntBASIC16.65■□□□□ 0.26
PRPHP41219 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRPHP41219 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRPHP41219 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PRPHP41219 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRPHP41219 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.65■□□□□ 0.26
PRPHP41219 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.65■□□□□ 0.26
PRPHP41219 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.65■□□□□ 0.26
PRPHP41219 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRPHP41219 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.65■□□□□ 0.26
PRPHP41219 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.65■□□□□ 0.26
PRPHP41219 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.65■□□□□ 0.26
PRPHP41219 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.65■□□□□ 0.26
PRPHP41219 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.65■□□□□ 0.26
PRPHP41219 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.65■□□□□ 0.26
PRPHP41219 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.65■□□□□ 0.26
PRPHP41219 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.65■□□□□ 0.26
PRPHP41219 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRPHP41219 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.65■□□□□ 0.26
PRPHP41219 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.65■□□□□ 0.26
PRPHP41219 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 AC027601.3-201ENST00000622907 509 ntBASIC16.65■□□□□ 0.26
PRPHP41219 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PRPHP41219 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PRPHP41219 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PRPHP41219 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.65■□□□□ 0.26
PRPHP41219 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.65■□□□□ 0.26
PRPHP41219 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.65■□□□□ 0.26
PRPHP41219 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.65■□□□□ 0.26
PRPHP41219 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.65■□□□□ 0.26
PRPHP41219 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRPHP41219 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRPHP41219 SHC1P1-201ENST00000425230 1745 ntBASIC16.65■□□□□ 0.26
PRPHP41219 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PRPHP41219 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PRPHP41219 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRPHP41219 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRPHP41219 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
PRPHP41219 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRPHP41219 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.64■□□□□ 0.25
PRPHP41219 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRPHP41219 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PRPHP41219 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRPHP41219 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRPHP41219 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRPHP41219 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRPHP41219 HIST2H2BB-201ENST00000449108 381 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms