Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.74■□□□□ 0.43
CHMLP26374 MYO15B-237ENST00000642007 4893 ntBASIC17.74■□□□□ 0.43
CHMLP26374 AC009093.10-201ENST00000641956 1442 ntBASIC17.74■□□□□ 0.43
CHMLP26374 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMLP26374 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 TCAM1P-207ENST00000485295 1537 ntBASIC17.74■□□□□ 0.43
CHMLP26374 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHMLP26374 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 ANKRD19P-201ENST00000338192 862 ntBASIC17.74■□□□□ 0.43
CHMLP26374 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.74■□□□□ 0.43
CHMLP26374 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMLP26374 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.74■□□□□ 0.43
CHMLP26374 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.74■□□□□ 0.43
CHMLP26374 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.74■□□□□ 0.43
CHMLP26374 AC027237.1-201ENST00000560942 655 ntBASIC17.74■□□□□ 0.43
CHMLP26374 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.74■□□□□ 0.43
CHMLP26374 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.74■□□□□ 0.43
CHMLP26374 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.74■□□□□ 0.43
CHMLP26374 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.74■□□□□ 0.43
CHMLP26374 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMLP26374 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHMLP26374 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHMLP26374 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.74■□□□□ 0.43
CHMLP26374 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.74■□□□□ 0.43
CHMLP26374 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CHMLP26374 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CHMLP26374 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMLP26374 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHMLP26374 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHMLP26374 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHMLP26374 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CHMLP26374 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMLP26374 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHMLP26374 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMLP26374 AC112492.5-201ENST00000421897 457 ntBASIC17.73■□□□□ 0.43
CHMLP26374 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMLP26374 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.73■□□□□ 0.43
CHMLP26374 U91328.1-201ENST00000437528 223 ntBASIC17.73■□□□□ 0.43
CHMLP26374 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMLP26374 HIST2H2BB-201ENST00000449108 381 ntBASIC17.73■□□□□ 0.43
CHMLP26374 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.73■□□□□ 0.43
CHMLP26374 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.73■□□□□ 0.43
CHMLP26374 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.73■□□□□ 0.43
CHMLP26374 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHMLP26374 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.73■□□□□ 0.43
CHMLP26374 AL512343.1-201ENST00000605837 169 ntBASIC17.73■□□□□ 0.43
CHMLP26374 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHMLP26374 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMLP26374 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMLP26374 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMLP26374 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CHMLP26374 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMLP26374 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMLP26374 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMLP26374 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CHMLP26374 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMLP26374 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 SHC1P1-201ENST00000425230 1745 ntBASIC17.72■□□□□ 0.43
CHMLP26374 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMLP26374 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHMLP26374 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMLP26374 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms