Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 AC007952.5-201ENST00000572818 1486 ntBASIC21.48■■□□□ 1.03
RAPGEF3O95398 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 GGTLC4P-201ENST00000402176 664 ntBASIC21.48■■□□□ 1.03
RAPGEF3O95398 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 ALG1L7P-201ENST00000502317 768 ntBASIC21.48■■□□□ 1.03
RAPGEF3O95398 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 INO80E-209ENST00000567254 625 ntTSL 2 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 CSTP2-201ENST00000610599 398 ntBASIC21.48■■□□□ 1.03
RAPGEF3O95398 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC21.48■■□□□ 1.03
RAPGEF3O95398 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC21.48■■□□□ 1.03
RAPGEF3O95398 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 AC010531.8-201ENST00000623341 685 ntBASIC21.48■■□□□ 1.03
RAPGEF3O95398 AL357143.1-203ENST00000639750 881 ntBASIC21.48■■□□□ 1.03
RAPGEF3O95398 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
RAPGEF3O95398 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAPGEF3O95398 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC21.47■■□□□ 1.03
RAPGEF3O95398 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC21.47■■□□□ 1.03
RAPGEF3O95398 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF3O95398 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 RPL3P2-204ENST00000413027 1203 ntBASIC21.46■■□□□ 1.03
RAPGEF3O95398 LINP1-201ENST00000417112 917 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 PEBP1P3-201ENST00000455475 548 ntBASIC21.46■■□□□ 1.03
RAPGEF3O95398 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 URB1-AS1-201ENST00000534991 831 ntBASIC21.46■■□□□ 1.03
RAPGEF3O95398 BMF-206ENST00000558774 671 ntTSL 3 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 AC142086.5-202ENST00000562500 217 ntBASIC21.46■■□□□ 1.03
RAPGEF3O95398 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 AL512324.3-201ENST00000619383 882 ntBASIC21.46■■□□□ 1.03
RAPGEF3O95398 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RAPGEF3O95398 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF3O95398 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms