Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAI2Q9Y5P3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 PUDPP3-201ENST00000445368 636 ntBASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 AC104306.2-201ENST00000451877 341 ntBASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 AL136301.1-201ENST00000615830 422 ntBASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAI2Q9Y5P3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAI2Q9Y5P3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.96□□□□□ -0.02
RAI2Q9Y5P3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAI2Q9Y5P3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
RAI2Q9Y5P3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAI2Q9Y5P3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
RAI2Q9Y5P3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAI2Q9Y5P3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAI2Q9Y5P3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAI2Q9Y5P3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
RAI2Q9Y5P3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 AC015656.1-201ENST00000624209 3578 ntBASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 EEF1DP1-201ENST00000585891 896 ntBASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 AP001002.3-201ENST00000623482 206 ntBASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.95□□□□□ -0.02
RAI2Q9Y5P3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms