Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBE2D4Q9Y2X8 PEG13-201ENST00000631594 5667 ntBASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 CETP-203ENST00000566128 1733 ntTSL 5 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AC090643.2-201ENST00000623442 2029 ntBASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AL022342.1-201ENST00000400363 863 ntBASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 TLE1P1-201ENST00000422965 589 ntBASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AC007969.1-201ENST00000433675 447 ntBASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AC114501.2-201ENST00000439631 535 ntBASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AC027369.6-201ENST00000525520 931 ntBASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AL121894.2-201ENST00000602977 491 ntBASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AL844908.2-201ENST00000609461 460 ntBASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 CROT-203ENST00000419147 2959 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AC011498.7-201ENST00000624986 2027 ntBASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 KRT8P35-201ENST00000483942 1338 ntBASIC10.33□□□□□ -0.76
UBE2D4Q9Y2X8 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 FAM90A12P-201ENST00000519497 2375 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 FAM90A24P-201ENST00000520792 2369 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 HSPA8P5-201ENST00000456928 2069 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 DGCR9-201ENST00000609630 2415 ntBASIC10.32□□□□□ -0.76
UBE2D4Q9Y2X8 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms