Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD248Q9HCU0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 AC097376.2-205ENST00000610159 5334 ntBASIC15.66■□□□□ 0.1
CD248Q9HCU0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD248Q9HCU0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD248Q9HCU0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD248Q9HCU0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD248Q9HCU0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD248Q9HCU0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 AP001582.1-201ENST00000525856 295 ntBASIC15.66■□□□□ 0.1
CD248Q9HCU0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD248Q9HCU0 AL133338.1-201ENST00000565695 1517 ntBASIC15.66■□□□□ 0.1
CD248Q9HCU0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD248Q9HCU0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 AL138799.1-201ENST00000448213 1675 ntBASIC15.66■□□□□ 0.1
CD248Q9HCU0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD248Q9HCU0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CD248Q9HCU0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD248Q9HCU0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD248Q9HCU0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 INTS4P1-203ENST00000641008 3683 ntBASIC15.65■□□□□ 0.1
CD248Q9HCU0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 RPL13AP20-201ENST00000459725 609 ntBASIC15.65■□□□□ 0.1
CD248Q9HCU0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.65■□□□□ 0.1
CD248Q9HCU0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD248Q9HCU0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CD248Q9HCU0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD248Q9HCU0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.64■□□□□ 0.09
CD248Q9HCU0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CD248Q9HCU0 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD248Q9HCU0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD248Q9HCU0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CD248Q9HCU0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD248Q9HCU0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.64■□□□□ 0.09
CD248Q9HCU0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CD248Q9HCU0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD248Q9HCU0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD248Q9HCU0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD248Q9HCU0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD248Q9HCU0 BRWD1P1-201ENST00000401091 371 ntBASIC15.64■□□□□ 0.09
CD248Q9HCU0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD248Q9HCU0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.64■□□□□ 0.09
CD248Q9HCU0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.64■□□□□ 0.09
CD248Q9HCU0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD248Q9HCU0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms