Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC092115.1-201ENST00000566277 1402 ntBASIC20.21■□□□□ 0.83
UBR1Q8IWV7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 AL162727.3-201ENST00000635661 2787 ntBASIC20.21■□□□□ 0.83
UBR1Q8IWV7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 HNRNPA1P21-201ENST00000424115 961 ntBASIC20.21■□□□□ 0.83
UBR1Q8IWV7 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 AC103563.1-201ENST00000429316 123 ntBASIC20.21■□□□□ 0.83
UBR1Q8IWV7 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 AC015909.5-201ENST00000624336 2266 ntBASIC20.21■□□□□ 0.83
UBR1Q8IWV7 AC020931.1-201ENST00000589622 1346 ntBASIC20.21■□□□□ 0.83
UBR1Q8IWV7 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC20.21■□□□□ 0.83
UBR1Q8IWV7 MYADML-201ENST00000474610 2147 ntBASIC20.2■□□□□ 0.83
UBR1Q8IWV7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 AC004801.1-201ENST00000549557 360 ntBASIC20.2■□□□□ 0.82
UBR1Q8IWV7 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 AC018442.1-201ENST00000421439 2061 ntBASIC20.2■□□□□ 0.82
UBR1Q8IWV7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC20.2■□□□□ 0.82
UBR1Q8IWV7 AL354702.1-201ENST00000442006 1960 ntBASIC20.19■□□□□ 0.82
UBR1Q8IWV7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 BMF-206ENST00000558774 671 ntTSL 3 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 MIR4254-201ENST00000581063 76 ntBASIC20.19■□□□□ 0.82
UBR1Q8IWV7 AL357143.1-203ENST00000639750 881 ntBASIC20.19■□□□□ 0.82
UBR1Q8IWV7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 TBC1D27-202ENST00000424239 1573 ntBASIC20.19■□□□□ 0.82
UBR1Q8IWV7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 RNA5SP491-201ENST00000362936 118 ntBASIC20.19■□□□□ 0.82
UBR1Q8IWV7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 PHF23-213ENST00000613632 850 ntTSL 5 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 AC113385.2-201ENST00000614465 762 ntBASIC20.19■□□□□ 0.82
UBR1Q8IWV7 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC20.19■□□□□ 0.82
UBR1Q8IWV7 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
UBR1Q8IWV7 SHMT1P1-201ENST00000419974 1312 ntBASIC20.19■□□□□ 0.82
UBR1Q8IWV7 AC232323.1-201ENST00000540724 2099 ntBASIC20.18■□□□□ 0.82
UBR1Q8IWV7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms