Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S2P56377 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.41□□□□□ -0.1
AP1S2P56377 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.41□□□□□ -0.1
AP1S2P56377 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AP1S2P56377 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S2P56377 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S2P56377 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S2P56377 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
AP1S2P56377 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 GAPDHP21-201ENST00000450301 1010 ntBASIC14.41□□□□□ -0.1
AP1S2P56377 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 COX5BP1-201ENST00000507622 393 ntBASIC14.41□□□□□ -0.1
AP1S2P56377 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.41□□□□□ -0.1
AP1S2P56377 AP003171.2-201ENST00000528208 925 ntBASIC14.41□□□□□ -0.1
AP1S2P56377 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.41□□□□□ -0.1
AP1S2P56377 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.41□□□□□ -0.1
AP1S2P56377 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S2P56377 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.41□□□□□ -0.1
AP1S2P56377 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S2P56377 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S2P56377 AC008825.2-201ENST00000603374 718 ntBASIC14.41□□□□□ -0.1
AP1S2P56377 ZACNP1-201ENST00000612259 710 ntBASIC14.41□□□□□ -0.1
AP1S2P56377 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S2P56377 KHSRPP1-201ENST00000427983 1768 ntBASIC14.41□□□□□ -0.1
AP1S2P56377 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
AP1S2P56377 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AP1S2P56377 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.41□□□□□ -0.1
AP1S2P56377 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 AC090505.1-201ENST00000430515 1834 ntBASIC14.41□□□□□ -0.1
AP1S2P56377 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
AP1S2P56377 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AP1S2P56377 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S2P56377 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S2P56377 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
AP1S2P56377 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S2P56377 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S2P56377 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
AP1S2P56377 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S2P56377 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.4□□□□□ -0.1
AP1S2P56377 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.4□□□□□ -0.1
AP1S2P56377 RPL7P3-201ENST00000441388 714 ntBASIC14.4□□□□□ -0.1
AP1S2P56377 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.4□□□□□ -0.1
AP1S2P56377 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.4□□□□□ -0.1
AP1S2P56377 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 AC079316.1-201ENST00000548397 411 ntBASIC14.4□□□□□ -0.1
AP1S2P56377 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.4□□□□□ -0.1
AP1S2P56377 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
AP1S2P56377 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.4□□□□□ -0.1
AP1S2P56377 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.4□□□□□ -0.1
AP1S2P56377 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 HSPA7-201ENST00000445535 1927 ntBASIC14.4□□□□□ -0.1
AP1S2P56377 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S2P56377 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S2P56377 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S2P56377 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S2P56377 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
AP1S2P56377 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S2P56377 AHCYP2-201ENST00000430630 1300 ntBASIC14.4□□□□□ -0.1
AP1S2P56377 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S2P56377 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms