Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.28■□□□□ 0.2
GPC3P51654 AC011742.3-201ENST00000439053 820 ntBASIC16.28■□□□□ 0.2
GPC3P51654 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
GPC3P51654 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 HLA-J-204ENST00000495278 958 ntBASIC16.28■□□□□ 0.2
GPC3P51654 SNORD3B-2-202ENST00000571722 791 ntBASIC16.28■□□□□ 0.2
GPC3P51654 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.28■□□□□ 0.2
GPC3P51654 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.28■□□□□ 0.2
GPC3P51654 MIR6720-201ENST00000611664 98 ntBASIC16.28■□□□□ 0.2
GPC3P51654 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.28■□□□□ 0.2
GPC3P51654 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.28■□□□□ 0.2
GPC3P51654 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GPC3P51654 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
GPC3P51654 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GPC3P51654 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
GPC3P51654 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC3P51654 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 MBLAC2-202ENST00000514906 1936 ntBASIC16.27■□□□□ 0.2
GPC3P51654 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.27■□□□□ 0.2
GPC3P51654 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 MTHFR-210ENST00000641407 2387 ntBASIC16.27■□□□□ 0.2
GPC3P51654 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GPC3P51654 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.27■□□□□ 0.2
GPC3P51654 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GPC3P51654 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GPC3P51654 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 AL662890.1-201ENST00000396818 632 ntBASIC16.27■□□□□ 0.2
GPC3P51654 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.27■□□□□ 0.2
GPC3P51654 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.27■□□□□ 0.2
GPC3P51654 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.27■□□□□ 0.2
GPC3P51654 AL160314.3-201ENST00000556041 767 ntBASIC16.27■□□□□ 0.2
GPC3P51654 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.27■□□□□ 0.2
GPC3P51654 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
GPC3P51654 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.27■□□□□ 0.2
GPC3P51654 AP000346.4-201ENST00000614827 381 ntBASIC16.27■□□□□ 0.2
GPC3P51654 AL136295.7-201ENST00000619226 1200 ntBASIC16.27■□□□□ 0.2
GPC3P51654 AC091544.8-201ENST00000619490 361 ntBASIC16.27■□□□□ 0.2
GPC3P51654 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.27■□□□□ 0.2
GPC3P51654 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC3P51654 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GPC3P51654 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GPC3P51654 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GPC3P51654 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.27■□□□□ 0.19
GPC3P51654 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
GPC3P51654 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GPC3P51654 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GPC3P51654 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.27■□□□□ 0.19
GPC3P51654 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GPC3P51654 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.27■□□□□ 0.19
GPC3P51654 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
GPC3P51654 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.26■□□□□ 0.19
GPC3P51654 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC3P51654 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GPC3P51654 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 LINC00552-201ENST00000625151 2579 ntBASIC16.26■□□□□ 0.19
GPC3P51654 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.26■□□□□ 0.19
GPC3P51654 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC3P51654 AL157407.1-201ENST00000435784 904 ntBASIC16.26■□□□□ 0.19
GPC3P51654 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GPC3P51654 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
GPC3P51654 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
GPC3P51654 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.26■□□□□ 0.19
GPC3P51654 CHMP4BP1-201ENST00000556017 588 ntBASIC16.26■□□□□ 0.19
GPC3P51654 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GPC3P51654 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.26■□□□□ 0.19
GPC3P51654 AC005962.1-201ENST00000584100 773 ntBASIC16.26■□□□□ 0.19
GPC3P51654 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms