Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.51□□□□□ -0.09
TRIM23P36406 AC006122.1-201ENST00000493323 440 ntBASIC14.51□□□□□ -0.09
TRIM23P36406 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 RBM8B-201ENST00000555532 525 ntBASIC14.51□□□□□ -0.09
TRIM23P36406 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.51□□□□□ -0.09
TRIM23P36406 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.51□□□□□ -0.09
TRIM23P36406 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
TRIM23P36406 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 AL805961.1-203ENST00000641078 1258 ntBASIC14.51□□□□□ -0.09
TRIM23P36406 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRIM23P36406 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRIM23P36406 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 CYP4F23P-201ENST00000593402 1579 ntBASIC14.51□□□□□ -0.09
TRIM23P36406 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.51□□□□□ -0.09
TRIM23P36406 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.5□□□□□ -0.09
TRIM23P36406 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRIM23P36406 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TRIM23P36406 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 RN7SKP214-201ENST00000364208 315 ntBASIC14.5□□□□□ -0.09
TRIM23P36406 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TRIM23P36406 MIR769-201ENST00000390225 118 ntBASIC14.5□□□□□ -0.09
TRIM23P36406 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.5□□□□□ -0.09
TRIM23P36406 SLC25A24P2-201ENST00000415059 510 ntBASIC14.5□□□□□ -0.09
TRIM23P36406 AC078875.1-201ENST00000431907 724 ntBASIC14.5□□□□□ -0.09
TRIM23P36406 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.5□□□□□ -0.09
TRIM23P36406 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.5□□□□□ -0.09
TRIM23P36406 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.5□□□□□ -0.09
TRIM23P36406 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.5□□□□□ -0.09
TRIM23P36406 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM23P36406 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM23P36406 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.5□□□□□ -0.09
TRIM23P36406 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM23P36406 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM23P36406 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRIM23P36406 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRIM23P36406 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
TRIM23P36406 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM23P36406 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM23P36406 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
TRIM23P36406 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM23P36406 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM23P36406 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM23P36406 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM23P36406 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM23P36406 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms