Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 CICP20-201ENST00000443330 2801 ntBASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 RN7SKP175-201ENST00000408472 289 ntBASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 KRT90P-201ENST00000549264 1064 ntBASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 OR10B1P-201ENST00000601666 907 ntBASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 AC010327.5-201ENST00000586923 3061 ntBASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 LINC01230-201ENST00000625222 3017 ntBASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 CNN2P8-201ENST00000421872 913 ntBASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 FAM8A4P-201ENST00000435433 1213 ntBASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 CR383656.12-201ENST00000549567 513 ntBASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 AC138951.2-201ENST00000623455 1161 ntBASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC162PA2VCL2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms