Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 AC027612.1-201ENST00000445234 2395 ntBASIC13.43□□□□□ -0.26
TMEM129A0AVI4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 INE1-201ENST00000456273 945 ntBASIC13.43□□□□□ -0.26
TMEM129A0AVI4 RN7SL752P-201ENST00000463779 287 ntBASIC13.43□□□□□ -0.26
TMEM129A0AVI4 AC104596.2-201ENST00000512793 793 ntBASIC13.43□□□□□ -0.26
TMEM129A0AVI4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 WFDC1-204ENST00000613603 549 ntBASIC13.43□□□□□ -0.26
TMEM129A0AVI4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM129A0AVI4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AC023794.5-201ENST00000564380 2157 ntBASIC13.42□□□□□ -0.26
TMEM129A0AVI4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 PTENP1-202ENST00000532280 3996 ntBASIC13.42□□□□□ -0.26
TMEM129A0AVI4 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AC004945.1-201ENST00000416738 983 ntBASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 FAM86LP-201ENST00000478302 853 ntBASIC13.42□□□□□ -0.26
TMEM129A0AVI4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AC036164.1-201ENST00000570544 333 ntBASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AC132938.2-201ENST00000579188 680 ntBASIC13.42□□□□□ -0.26
TMEM129A0AVI4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 IGHV3-72-202ENST00000621503 303 ntBASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AL591163.1-201ENST00000641757 987 ntBASIC13.42□□□□□ -0.26
TMEM129A0AVI4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AC012617.1-204ENST00000586340 2305 ntBASIC13.42□□□□□ -0.26
TMEM129A0AVI4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
TMEM129A0AVI4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms