Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.27■□□□□ 0.03
HCFC2Q9Y5Z7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.27■□□□□ 0.03
HCFC2Q9Y5Z7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC2Q9Y5Z7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC2Q9Y5Z7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 AC073869.2-201ENST00000417338 1026 ntBASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 DPY19L2P5-201ENST00000456300 331 ntBASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 AC026410.1-201ENST00000507366 1101 ntBASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 HERC2P11-201ENST00000562845 725 ntBASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 AC100756.2-201ENST00000569537 736 ntBASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 FO393412.1-201ENST00000619841 382 ntBASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC2Q9Y5Z7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 AC234644.1-201ENST00000406065 370 ntBASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 LINC00634-202ENST00000505157 222 ntBASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 AC084752.1-201ENST00000509766 622 ntBASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC2Q9Y5Z7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC2Q9Y5Z7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC2Q9Y5Z7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HCFC2Q9Y5Z7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC2Q9Y5Z7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC2Q9Y5Z7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.24■□□□□ 0.03
HCFC2Q9Y5Z7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC2Q9Y5Z7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HCFC2Q9Y5Z7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms