Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 MEX3B-202ENST00000558133 4333 ntBASIC14.04□□□□□ -0.16
AP4S1Q9Y587 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 AC069335.1-201ENST00000489972 472 ntBASIC14.04□□□□□ -0.16
AP4S1Q9Y587 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 AL691432.3-201ENST00000621860 400 ntBASIC14.04□□□□□ -0.16
AP4S1Q9Y587 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
AP4S1Q9Y587 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 AL157996.1-201ENST00000624684 2299 ntBASIC14.03□□□□□ -0.16
AP4S1Q9Y587 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP4S1Q9Y587 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms