Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 AC022447.6-201ENST00000515522 438 ntBASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 API5-211ENST00000534695 560 ntTSL 5 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 AC133539.2-201ENST00000604757 467 ntBASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 AL355385.1-201ENST00000606123 409 ntBASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 AC008494.3-201ENST00000606615 944 ntBASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RHBDD3Q9Y3P4 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RHBDD3Q9Y3P4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 AL139094.1-201ENST00000405549 1188 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms