Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.25□□□□□ -0.29
NLKQ9UBE8 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NLKQ9UBE8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 SLED1-202ENST00000512051 380 ntBASIC13.24□□□□□ -0.29
NLKQ9UBE8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 AL844908.2-201ENST00000609461 460 ntBASIC13.24□□□□□ -0.29
NLKQ9UBE8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NLKQ9UBE8 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.24□□□□□ -0.29
NLKQ9UBE8 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 AC020658.7-201ENST00000624274 2442 ntBASIC13.23□□□□□ -0.29
NLKQ9UBE8 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NLKQ9UBE8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 BASP1P1-201ENST00000430708 665 ntBASIC13.23□□□□□ -0.29
NLKQ9UBE8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 AL512638.1-201ENST00000457493 794 ntBASIC13.23□□□□□ -0.29
NLKQ9UBE8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.23□□□□□ -0.29
NLKQ9UBE8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms