Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF2Q99496 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF2Q99496 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
RNF2Q99496 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.9□□□□□ -0.5
RNF2Q99496 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.9□□□□□ -0.5
RNF2Q99496 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.9□□□□□ -0.5
RNF2Q99496 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.9□□□□□ -0.5
RNF2Q99496 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 AC009477.1-201ENST00000452936 217 ntBASIC11.9□□□□□ -0.5
RNF2Q99496 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 AC004890.2-204ENST00000481968 304 ntBASIC11.9□□□□□ -0.5
RNF2Q99496 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 KRT8P22-201ENST00000562317 1415 ntBASIC11.9□□□□□ -0.5
RNF2Q99496 AC009407.1-201ENST00000568958 598 ntBASIC11.9□□□□□ -0.5
RNF2Q99496 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.9□□□□□ -0.5
RNF2Q99496 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 AC022144.1-201ENST00000602255 1580 ntBASIC11.9□□□□□ -0.5
RNF2Q99496 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF2Q99496 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.9□□□□□ -0.5
RNF2Q99496 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RNF2Q99496 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.9□□□□□ -0.51
RNF2Q99496 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
RNF2Q99496 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
RNF2Q99496 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
RNF2Q99496 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.9□□□□□ -0.51
RNF2Q99496 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
RNF2Q99496 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RNF2Q99496 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RNF2Q99496 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RNF2Q99496 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.89□□□□□ -0.51
RNF2Q99496 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RNF2Q99496 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.89□□□□□ -0.51
RNF2Q99496 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.89□□□□□ -0.51
RNF2Q99496 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF2Q99496 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms