Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC241952.1-201ENST00000612480 6897 ntBASIC11.3□□□□□ -0.6
AP1S3Q96PC3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AP1S3Q96PC3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 HSPA7-201ENST00000445535 1927 ntBASIC11.29□□□□□ -0.6
AP1S3Q96PC3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 CICP11-201ENST00000434745 2827 ntBASIC11.29□□□□□ -0.6
AP1S3Q96PC3 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 IGHV3-62-201ENST00000520057 340 ntBASIC11.29□□□□□ -0.6
AP1S3Q96PC3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 AL662844.1-201ENST00000546340 181 ntBASIC11.29□□□□□ -0.6
AP1S3Q96PC3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 AL691432.3-201ENST00000621860 400 ntBASIC11.29□□□□□ -0.6
AP1S3Q96PC3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AP1S3Q96PC3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 AC104109.2-201ENST00000602919 1418 ntBASIC11.28□□□□□ -0.6
AP1S3Q96PC3 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
AP1S3Q96PC3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms