Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TM9SF4Q92544 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.06□□□□□ -0.16
TM9SF4Q92544 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.05□□□□□ -0.16
TM9SF4Q92544 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 CNN2P10-201ENST00000443067 918 ntBASIC14.05□□□□□ -0.16
TM9SF4Q92544 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 AC244157.2-201ENST00000616239 1006 ntBASIC14.05□□□□□ -0.16
TM9SF4Q92544 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 KRT8P14-201ENST00000414254 1442 ntBASIC14.05□□□□□ -0.16
TM9SF4Q92544 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.05□□□□□ -0.16
TM9SF4Q92544 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TM9SF4Q92544 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.05□□□□□ -0.16
TM9SF4Q92544 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.04□□□□□ -0.16
TM9SF4Q92544 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms