Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TPGS2Q68CL5 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 MIR557-201ENST00000385239 98 ntBASIC15.32■□□□□ 0.04
TPGS2Q68CL5 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 AC069218.1-201ENST00000435269 762 ntBASIC15.32■□□□□ 0.04
TPGS2Q68CL5 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 DUX4L50-201ENST00000455245 715 ntBASIC15.32■□□□□ 0.04
TPGS2Q68CL5 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 AC130709.1-201ENST00000484779 1212 ntBASIC15.32■□□□□ 0.04
TPGS2Q68CL5 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 AC018635.2-201ENST00000608625 364 ntBASIC15.32■□□□□ 0.04
TPGS2Q68CL5 AL022334.2-201ENST00000610000 484 ntBASIC15.32■□□□□ 0.04
TPGS2Q68CL5 COX6A1P2-201ENST00000620597 330 ntBASIC15.32■□□□□ 0.04
TPGS2Q68CL5 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 KRT8P31-201ENST00000504812 1408 ntBASIC15.32■□□□□ 0.04
TPGS2Q68CL5 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 LINC00528-201ENST00000600723 2160 ntBASIC15.32■□□□□ 0.04
TPGS2Q68CL5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPGS2Q68CL5 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPGS2Q68CL5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPGS2Q68CL5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TPGS2Q68CL5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.31■□□□□ 0.04
TPGS2Q68CL5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPGS2Q68CL5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TPGS2Q68CL5 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.31■□□□□ 0.04
TPGS2Q68CL5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPGS2Q68CL5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPGS2Q68CL5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms