Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
CDH6P55285 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH6P55285 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CDH6P55285 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CDH6P55285 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CDH6P55285 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDH6P55285 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDH6P55285 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.43■□□□□ 0.06
CDH6P55285 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CDH6P55285 AC092933.1-201ENST00000393644 945 ntBASIC15.43■□□□□ 0.06
CDH6P55285 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH6P55285 C2orf27AP3-201ENST00000434123 579 ntBASIC15.43■□□□□ 0.06
CDH6P55285 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH6P55285 KRT17P7-201ENST00000451704 1104 ntBASIC15.43■□□□□ 0.06
CDH6P55285 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH6P55285 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH6P55285 AL354718.3-201ENST00000616414 581 ntBASIC15.43■□□□□ 0.06
CDH6P55285 AC132938.4-201ENST00000623835 848 ntBASIC15.43■□□□□ 0.06
CDH6P55285 CR382287.1-201ENST00000623954 586 ntBASIC15.43■□□□□ 0.06
CDH6P55285 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH6P55285 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
CDH6P55285 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 AC152010.1-201ENST00000415779 2006 ntBASIC15.43■□□□□ 0.06
CDH6P55285 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH6P55285 AC015688.4-201ENST00000580780 1647 ntBASIC15.43■□□□□ 0.06
CDH6P55285 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CDH6P55285 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH6P55285 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CDH6P55285 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH6P55285 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CDH6P55285 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 AL590640.2-201ENST00000457038 527 ntBASIC15.42■□□□□ 0.06
CDH6P55285 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH6P55285 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CDH6P55285 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CDH6P55285 AC233724.13-201ENST00000598383 410 ntBASIC15.42■□□□□ 0.06
CDH6P55285 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.42■□□□□ 0.06
CDH6P55285 AL022328.1-201ENST00000610050 478 ntBASIC15.42■□□□□ 0.06
CDH6P55285 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH6P55285 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.42■□□□□ 0.06
CDH6P55285 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CDH6P55285 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH6P55285 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CDH6P55285 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH6P55285 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH6P55285 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH6P55285 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH6P55285 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH6P55285 MYADML-201ENST00000474610 2147 ntBASIC15.41■□□□□ 0.06
CDH6P55285 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH6P55285 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH6P55285 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDH6P55285 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH6P55285 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH6P55285 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH6P55285 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH6P55285 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH6P55285 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms