Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 LTF-203ENST00000426532 2494 ntTSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
APOC4P55056 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC10.85□□□□□ -0.67
APOC4P55056 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.85□□□□□ -0.67
APOC4P55056 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
APOC4P55056 AC009093.2-202ENST00000620513 2079 ntBASIC10.85□□□□□ -0.67
APOC4P55056 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 MRPL37P1-201ENST00000592451 1337 ntBASIC10.84□□□□□ -0.67
APOC4P55056 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
APOC4P55056 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
APOC4P55056 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC10.84□□□□□ -0.67
APOC4P55056 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC10.84□□□□□ -0.67
APOC4P55056 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC10.84□□□□□ -0.67
APOC4P55056 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
APOC4P55056 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
APOC4P55056 PTPA-215ENST00000432124 567 ntTSL 4 BASIC10.84□□□□□ -0.67
APOC4P55056 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC10.84□□□□□ -0.67
APOC4P55056 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
APOC4P55056 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.84□□□□□ -0.67
APOC4P55056 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
APOC4P55056 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC10.84□□□□□ -0.67
APOC4P55056 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC10.84□□□□□ -0.67
APOC4P55056 EID1-202ENST00000560490 584 ntTSL 3 BASIC10.84□□□□□ -0.67
APOC4P55056 AC005730.2-201ENST00000564549 1184 ntBASIC10.84□□□□□ -0.67
APOC4P55056 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC10.84□□□□□ -0.67
APOC4P55056 AC009955.4-201ENST00000597192 544 ntBASIC10.84□□□□□ -0.67
APOC4P55056 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC10.84□□□□□ -0.67
APOC4P55056 AC091544.8-201ENST00000619490 361 ntBASIC10.84□□□□□ -0.67
APOC4P55056 AC004923.1-202ENST00000642106 209 ntBASIC10.84□□□□□ -0.67
APOC4P55056 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 ACE3P-201ENST00000423435 1973 ntBASIC10.84□□□□□ -0.67
APOC4P55056 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
APOC4P55056 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
APOC4P55056 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC10.84□□□□□ -0.67
APOC4P55056 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.84□□□□□ -0.67
APOC4P55056 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC10.84□□□□□ -0.67
APOC4P55056 CELP-203ENST00000624767 2414 ntTSL 5 BASIC10.84□□□□□ -0.67
APOC4P55056 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
APOC4P55056 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.84□□□□□ -0.67
APOC4P55056 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms