Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.16□□□□□ -0.3
LHX2P50458 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.16□□□□□ -0.3
LHX2P50458 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.16□□□□□ -0.3
LHX2P50458 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.16□□□□□ -0.3
LHX2P50458 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LHX2P50458 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.16□□□□□ -0.3
LHX2P50458 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.16□□□□□ -0.3
LHX2P50458 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.16□□□□□ -0.3
LHX2P50458 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.16□□□□□ -0.3
LHX2P50458 AL008707.1-201ENST00000422498 534 ntBASIC13.16□□□□□ -0.3
LHX2P50458 AC005077.2-201ENST00000449786 690 ntBASIC13.16□□□□□ -0.3
LHX2P50458 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.16□□□□□ -0.3
LHX2P50458 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.16□□□□□ -0.3
LHX2P50458 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.16□□□□□ -0.3
LHX2P50458 AC009779.1-201ENST00000551138 283 ntBASIC13.16□□□□□ -0.3
LHX2P50458 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.16□□□□□ -0.3
LHX2P50458 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.16□□□□□ -0.3
LHX2P50458 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.16□□□□□ -0.3
LHX2P50458 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.16□□□□□ -0.3
LHX2P50458 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LHX2P50458 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.16□□□□□ -0.3
LHX2P50458 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.16□□□□□ -0.3
LHX2P50458 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LHX2P50458 AP002414.2-201ENST00000591780 3365 ntBASIC13.16□□□□□ -0.3
LHX2P50458 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LHX2P50458 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.16□□□□□ -0.3
LHX2P50458 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LHX2P50458 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.16□□□□□ -0.3
LHX2P50458 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 CYP4F23P-201ENST00000593402 1579 ntBASIC13.15□□□□□ -0.3
LHX2P50458 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LHX2P50458 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.15□□□□□ -0.3
LHX2P50458 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.15□□□□□ -0.3
LHX2P50458 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.15□□□□□ -0.3
LHX2P50458 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.15□□□□□ -0.3
LHX2P50458 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.15□□□□□ -0.3
LHX2P50458 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.15□□□□□ -0.3
LHX2P50458 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.15□□□□□ -0.3
LHX2P50458 AC125604.1-201ENST00000496255 707 ntBASIC13.15□□□□□ -0.3
LHX2P50458 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.15□□□□□ -0.3
LHX2P50458 AC133540.1-201ENST00000620845 1019 ntBASIC13.15□□□□□ -0.3
LHX2P50458 AC100757.4-201ENST00000626934 759 ntBASIC13.15□□□□□ -0.3
LHX2P50458 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
LHX2P50458 AL805961.1-203ENST00000641078 1258 ntBASIC13.15□□□□□ -0.3
LHX2P50458 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
LHX2P50458 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LHX2P50458 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LHX2P50458 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.15□□□□□ -0.3
LHX2P50458 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.15□□□□□ -0.3
LHX2P50458 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.15□□□□□ -0.3
LHX2P50458 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LHX2P50458 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms