Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 CSPG4P11-201ENST00000560634 4910 ntBASIC11.78□□□□□ -0.52
CDC34P49427 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CDC34P49427 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 AL121723.1-201ENST00000445194 1519 ntBASIC11.78□□□□□ -0.52
CDC34P49427 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CDC34P49427 AC007967.2-201ENST00000432613 625 ntBASIC11.78□□□□□ -0.52
CDC34P49427 KRT18P64-201ENST00000434946 1219 ntBASIC11.78□□□□□ -0.52
CDC34P49427 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 SLC25A39P2-201ENST00000537614 270 ntBASIC11.78□□□□□ -0.52
CDC34P49427 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 LINC01225-203ENST00000563550 1244 ntBASIC11.78□□□□□ -0.52
CDC34P49427 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.78□□□□□ -0.52
CDC34P49427 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
CDC34P49427 AL157414.3-201ENST00000624276 1954 ntBASIC11.78□□□□□ -0.52
CDC34P49427 CICP16-201ENST00000502609 2813 ntBASIC11.78□□□□□ -0.52
CDC34P49427 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC34P49427 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC34P49427 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CDC34P49427 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC34P49427 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.77□□□□□ -0.52
CDC34P49427 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.77□□□□□ -0.52
CDC34P49427 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC34P49427 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CDC34P49427 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.77□□□□□ -0.52
CDC34P49427 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC34P49427 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC34P49427 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC34P49427 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 AC111170.3-201ENST00000624282 2464 ntBASIC11.77□□□□□ -0.53
CDC34P49427 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.77□□□□□ -0.53
CDC34P49427 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
CDC34P49427 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC34P49427 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms