Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCL1P22362 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.71□□□□□ -0.37
CCL1P22362 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
CCL1P22362 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
CCL1P22362 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CCL1P22362 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CCL1P22362 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCL1P22362 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL1P22362 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL1P22362 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CCL1P22362 DGCR5-201ENST00000399539 862 ntBASIC12.71□□□□□ -0.37
CCL1P22362 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL1P22362 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL1P22362 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.71□□□□□ -0.37
CCL1P22362 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
CCL1P22362 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.71□□□□□ -0.37
CCL1P22362 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 AC025279.2-201ENST00000569730 653 ntBASIC12.71□□□□□ -0.37
CCL1P22362 GNRHR2-203ENST00000581100 1187 ntBASIC12.71□□□□□ -0.37
CCL1P22362 AC010319.3-201ENST00000597028 470 ntBASIC12.71□□□□□ -0.37
CCL1P22362 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.71□□□□□ -0.37
CCL1P22362 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.71□□□□□ -0.37
CCL1P22362 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.71□□□□□ -0.37
CCL1P22362 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CCL1P22362 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.71□□□□□ -0.37
CCL1P22362 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.71□□□□□ -0.37
CCL1P22362 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CCL1P22362 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL1P22362 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL1P22362 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
CCL1P22362 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL1P22362 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL1P22362 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL1P22362 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL1P22362 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CCL1P22362 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CCL1P22362 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.71□□□□□ -0.38
CCL1P22362 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL1P22362 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CCL1P22362 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL1P22362 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
CCL1P22362 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.71□□□□□ -0.38
CCL1P22362 AC009093.10-201ENST00000641956 1442 ntBASIC12.71□□□□□ -0.38
CCL1P22362 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
CCL1P22362 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL1P22362 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL1P22362 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL1P22362 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL1P22362 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CCL1P22362 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL1P22362 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 TPM3P8-201ENST00000330554 643 ntBASIC12.7□□□□□ -0.38
CCL1P22362 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
CCL1P22362 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.7□□□□□ -0.38
CCL1P22362 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL1P22362 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.7□□□□□ -0.38
CCL1P22362 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL1P22362 AC106760.1-201ENST00000508690 800 ntBASIC12.7□□□□□ -0.38
CCL1P22362 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.7□□□□□ -0.38
CCL1P22362 TDH-203ENST00000531764 1110 ntBASIC12.7□□□□□ -0.38
CCL1P22362 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.7□□□□□ -0.38
CCL1P22362 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms