Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC018629.1-201ENST00000623381 1736 ntBASIC16.5■□□□□ 0.23
CYP3A4P08684 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 LINC00552-201ENST00000625151 2579 ntBASIC16.5■□□□□ 0.23
CYP3A4P08684 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 AC064801.2-201ENST00000625052 1303 ntBASIC16.5■□□□□ 0.23
CYP3A4P08684 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CYP3A4P08684 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.5■□□□□ 0.23
CYP3A4P08684 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.5■□□□□ 0.23
CYP3A4P08684 OR2R1P-201ENST00000441404 914 ntBASIC16.5■□□□□ 0.23
CYP3A4P08684 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 RCC2P8-201ENST00000502779 1035 ntBASIC16.5■□□□□ 0.23
CYP3A4P08684 PGAM1P5-201ENST00000548011 764 ntBASIC16.5■□□□□ 0.23
CYP3A4P08684 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.5■□□□□ 0.23
CYP3A4P08684 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.5■□□□□ 0.23
CYP3A4P08684 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.5■□□□□ 0.23
CYP3A4P08684 AC124068.2-201ENST00000569473 1109 ntBASIC16.5■□□□□ 0.23
CYP3A4P08684 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.5■□□□□ 0.23
CYP3A4P08684 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.5■□□□□ 0.23
CYP3A4P08684 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CYP3A4P08684 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.5■□□□□ 0.23
CYP3A4P08684 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CYP3A4P08684 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CYP3A4P08684 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 AL133338.1-201ENST00000565695 1517 ntBASIC16.5■□□□□ 0.23
CYP3A4P08684 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CYP3A4P08684 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.49■□□□□ 0.23
CYP3A4P08684 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 RN7SL832P-201ENST00000607781 1756 ntBASIC16.49■□□□□ 0.23
CYP3A4P08684 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.49■□□□□ 0.23
CYP3A4P08684 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.49■□□□□ 0.23
CYP3A4P08684 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
CYP3A4P08684 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CYP3A4P08684 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 AC005077.2-201ENST00000449786 690 ntBASIC16.49■□□□□ 0.23
CYP3A4P08684 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.49■□□□□ 0.23
CYP3A4P08684 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.49■□□□□ 0.23
CYP3A4P08684 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.49■□□□□ 0.23
CYP3A4P08684 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.49■□□□□ 0.23
CYP3A4P08684 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.49■□□□□ 0.23
CYP3A4P08684 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.49■□□□□ 0.23
CYP3A4P08684 ACTG1P17-201ENST00000558391 1119 ntBASIC16.49■□□□□ 0.23
CYP3A4P08684 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CYP3A4P08684 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CYP3A4P08684 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CYP3A4P08684 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CYP3A4P08684 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CYP3A4P08684 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CYP3A4P08684 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.49■□□□□ 0.23
CYP3A4P08684 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.48■□□□□ 0.23
CYP3A4P08684 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CYP3A4P08684 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CYP3A4P08684 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CYP3A4P08684 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CYP3A4P08684 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CYP3A4P08684 CYP46A4P-201ENST00000414953 267 ntBASIC16.48■□□□□ 0.23
CYP3A4P08684 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.48■□□□□ 0.23
CYP3A4P08684 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.48■□□□□ 0.23
CYP3A4P08684 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.48■□□□□ 0.23
CYP3A4P08684 SPTLC1P5-201ENST00000450718 252 ntBASIC16.48■□□□□ 0.23
CYP3A4P08684 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.48■□□□□ 0.23
CYP3A4P08684 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.48■□□□□ 0.23
CYP3A4P08684 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.48■□□□□ 0.23
CYP3A4P08684 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.48■□□□□ 0.23
CYP3A4P08684 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms