Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.9□□□□□ -0.02
RFPL1O75677 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RFPL1O75677 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.89□□□□□ -0.03
RFPL1O75677 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.89□□□□□ -0.03
RFPL1O75677 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RFPL1O75677 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RFPL1O75677 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.89□□□□□ -0.03
RFPL1O75677 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.89□□□□□ -0.03
RFPL1O75677 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.89□□□□□ -0.03
RFPL1O75677 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.89□□□□□ -0.03
RFPL1O75677 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.89□□□□□ -0.03
RFPL1O75677 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 KRT43P-201ENST00000434019 910 ntBASIC14.89□□□□□ -0.03
RFPL1O75677 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.89□□□□□ -0.03
RFPL1O75677 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.89□□□□□ -0.03
RFPL1O75677 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.89□□□□□ -0.03
RFPL1O75677 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RFPL1O75677 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RFPL1O75677 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.89□□□□□ -0.03
RFPL1O75677 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RFPL1O75677 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFPL1O75677 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.88□□□□□ -0.03
RFPL1O75677 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RFPL1O75677 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 TCAM1P-207ENST00000485295 1537 ntBASIC14.88□□□□□ -0.03
RFPL1O75677 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.88□□□□□ -0.03
RFPL1O75677 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.88□□□□□ -0.03
RFPL1O75677 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.88□□□□□ -0.03
RFPL1O75677 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.88□□□□□ -0.03
RFPL1O75677 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.88□□□□□ -0.03
RFPL1O75677 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.88□□□□□ -0.03
RFPL1O75677 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.88□□□□□ -0.03
RFPL1O75677 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.88□□□□□ -0.03
RFPL1O75677 AC008735.3-201ENST00000596646 500 ntBASIC14.88□□□□□ -0.03
RFPL1O75677 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RFPL1O75677 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RFPL1O75677 BX539320.1-201ENST00000623759 877 ntBASIC14.88□□□□□ -0.03
RFPL1O75677 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RFPL1O75677 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.88□□□□□ -0.03
RFPL1O75677 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
RFPL1O75677 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RFPL1O75677 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RFPL1O75677 AC126755.1-201ENST00000525846 6405 ntBASIC14.88□□□□□ -0.03
RFPL1O75677 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFPL1O75677 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.88□□□□□ -0.03
RFPL1O75677 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RFPL1O75677 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RFPL1O75677 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFPL1O75677 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFPL1O75677 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.87□□□□□ -0.03
RFPL1O75677 AC011840.2-201ENST00000563063 1520 ntBASIC14.87□□□□□ -0.03
RFPL1O75677 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFPL1O75677 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFPL1O75677 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFPL1O75677 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFPL1O75677 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
RFPL1O75677 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RFPL1O75677 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFPL1O75677 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFPL1O75677 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms