Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN5O00501 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN5O00501 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN5O00501 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN5O00501 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLDN5O00501 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLDN5O00501 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN5O00501 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN5O00501 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN5O00501 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN5O00501 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN5O00501 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN5O00501 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN5O00501 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN5O00501 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN5O00501 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
CLDN5O00501 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 DPM3-202ENST00000368399 517 ntBASIC15.56■□□□□ 0.08
CLDN5O00501 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CLDN5O00501 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 AL157407.1-201ENST00000435784 904 ntBASIC15.56■□□□□ 0.08
CLDN5O00501 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.56■□□□□ 0.08
CLDN5O00501 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
CLDN5O00501 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.56■□□□□ 0.08
CLDN5O00501 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLDN5O00501 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN5O00501 AC004923.1-202ENST00000642106 209 ntBASIC15.56■□□□□ 0.08
CLDN5O00501 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLDN5O00501 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN5O00501 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN5O00501 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN5O00501 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLDN5O00501 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CLDN5O00501 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
CLDN5O00501 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN5O00501 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLDN5O00501 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 TMBIM7P-202ENST00000641474 1516 ntBASIC15.55■□□□□ 0.08
CLDN5O00501 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.55■□□□□ 0.08
CLDN5O00501 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN5O00501 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLDN5O00501 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLDN5O00501 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.55■□□□□ 0.08
CLDN5O00501 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLDN5O00501 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.55■□□□□ 0.08
CLDN5O00501 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.55■□□□□ 0.08
CLDN5O00501 FNTAP2-201ENST00000430308 634 ntBASIC15.55■□□□□ 0.08
CLDN5O00501 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 AL035414.1-201ENST00000451327 857 ntBASIC15.55■□□□□ 0.08
CLDN5O00501 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN5O00501 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN5O00501 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN5O00501 AC008805.1-201ENST00000590892 364 ntBASIC15.55■□□□□ 0.08
CLDN5O00501 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms