Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AL031595.1-201ENST00000623969 4709 ntBASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 AC087499.5-201ENST00000452760 1342 ntBASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 AL596442.2-201ENST00000610240 980 ntBASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 RET-205ENST00000615310 4337 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC10.36□□□□□ -0.75
UBE2D4Q9Y2X8 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 MEIS3P1-201ENST00000495167 958 ntBASIC10.35□□□□□ -0.75
UBE2D4Q9Y2X8 AC026410.3-201ENST00000514280 936 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms