Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 FTLP5-201ENST00000586853 534 ntBASIC15.93■□□□□ 0.14
SNX27Q96L92 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.93■□□□□ 0.14
SNX27Q96L92 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.93■□□□□ 0.14
SNX27Q96L92 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SNX27Q96L92 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.93■□□□□ 0.14
SNX27Q96L92 FGD5P1-202ENST00000614866 2498 ntBASIC15.93■□□□□ 0.14
SNX27Q96L92 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
SNX27Q96L92 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNX27Q96L92 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNX27Q96L92 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SNX27Q96L92 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
SNX27Q96L92 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SNX27Q96L92 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SNX27Q96L92 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SNX27Q96L92 TSPY26P-202ENST00000565928 3884 ntBASIC15.92■□□□□ 0.14
SNX27Q96L92 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SNX27Q96L92 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SNX27Q96L92 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.92■□□□□ 0.14
SNX27Q96L92 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SNX27Q96L92 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.92■□□□□ 0.14
SNX27Q96L92 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SNX27Q96L92 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.92■□□□□ 0.14
SNX27Q96L92 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SNX27Q96L92 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.92■□□□□ 0.14
SNX27Q96L92 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SNX27Q96L92 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.92■□□□□ 0.14
SNX27Q96L92 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC15.92■□□□□ 0.14
SNX27Q96L92 MARK2P5-201ENST00000507649 634 ntBASIC15.92■□□□□ 0.14
SNX27Q96L92 SCARNA21-201ENST00000517026 139 ntBASIC15.92■□□□□ 0.14
SNX27Q96L92 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.92■□□□□ 0.14
SNX27Q96L92 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.92■□□□□ 0.14
SNX27Q96L92 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.92■□□□□ 0.14
SNX27Q96L92 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.92■□□□□ 0.14
SNX27Q96L92 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.92■□□□□ 0.14
SNX27Q96L92 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.92■□□□□ 0.14
SNX27Q96L92 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.92■□□□□ 0.14
SNX27Q96L92 AC008805.1-201ENST00000590892 364 ntBASIC15.92■□□□□ 0.14
SNX27Q96L92 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.92■□□□□ 0.14
SNX27Q96L92 NDUFV2P1-201ENST00000596415 907 ntBASIC15.92■□□□□ 0.14
SNX27Q96L92 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC15.92■□□□□ 0.14
SNX27Q96L92 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.92■□□□□ 0.14
SNX27Q96L92 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNX27Q96L92 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SNX27Q96L92 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SNX27Q96L92 FAM90A7P-201ENST00000382628 1395 ntBASIC15.91■□□□□ 0.14
SNX27Q96L92 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SNX27Q96L92 FAM90A23P-201ENST00000400136 1395 ntBASIC15.91■□□□□ 0.14
SNX27Q96L92 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.91■□□□□ 0.14
SNX27Q96L92 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.91■□□□□ 0.14
SNX27Q96L92 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SNX27Q96L92 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.91■□□□□ 0.14
SNX27Q96L92 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.91■□□□□ 0.14
SNX27Q96L92 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.91■□□□□ 0.14
SNX27Q96L92 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.91■□□□□ 0.14
SNX27Q96L92 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.91■□□□□ 0.14
SNX27Q96L92 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.91■□□□□ 0.14
SNX27Q96L92 SNORD3B-2-202ENST00000571722 791 ntBASIC15.91■□□□□ 0.14
SNX27Q96L92 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.91■□□□□ 0.14
SNX27Q96L92 AC091812.3-201ENST00000621362 345 ntBASIC15.91■□□□□ 0.14
SNX27Q96L92 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.91■□□□□ 0.14
SNX27Q96L92 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
SNX27Q96L92 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SNX27Q96L92 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNX27Q96L92 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms