Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.1□□□□□ -0.31
DYNC2LI1Q8TCX1 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DYNC2LI1Q8TCX1 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DYNC2LI1Q8TCX1 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DYNC2LI1Q8TCX1 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DYNC2LI1Q8TCX1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 AL445250.1-201ENST00000641671 2259 ntBASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 MIR346-201ENST00000362234 95 ntBASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 SPDYE17-201ENST00000412399 783 ntBASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 AC034105.1-201ENST00000563488 319 ntBASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 AKAP8P1-201ENST00000434743 1349 ntBASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
DYNC2LI1Q8TCX1 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
DYNC2LI1Q8TCX1 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DYNC2LI1Q8TCX1 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.08□□□□□ -0.31
DYNC2LI1Q8TCX1 AL121723.1-201ENST00000445194 1519 ntBASIC13.08□□□□□ -0.31
DYNC2LI1Q8TCX1 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
DYNC2LI1Q8TCX1 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DYNC2LI1Q8TCX1 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
DYNC2LI1Q8TCX1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.08□□□□□ -0.31
DYNC2LI1Q8TCX1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
DYNC2LI1Q8TCX1 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
DYNC2LI1Q8TCX1 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 KRT18P43-201ENST00000469825 1281 ntBASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 AC004066.1-201ENST00000502488 802 ntBASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 KRT18P8-201ENST00000581937 1246 ntBASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 AGGF1P10-201ENST00000635005 2191 ntBASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
DYNC2LI1Q8TCX1 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms