Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PROM2Q8N271 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PROM2Q8N271 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PROM2Q8N271 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.6■□□□□ 0.57
PROM2Q8N271 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PROM2Q8N271 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.6■□□□□ 0.57
PROM2Q8N271 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PROM2Q8N271 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC18.6■□□□□ 0.57
PROM2Q8N271 AL451000.1-201ENST00000451300 1186 ntBASIC18.6■□□□□ 0.57
PROM2Q8N271 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.6■□□□□ 0.57
PROM2Q8N271 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC18.6■□□□□ 0.57
PROM2Q8N271 RPS23-207ENST00000511844 530 ntTSL 2 BASIC18.6■□□□□ 0.57
PROM2Q8N271 IGHV1-12-201ENST00000518307 205 ntBASIC18.6■□□□□ 0.57
PROM2Q8N271 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC18.6■□□□□ 0.57
PROM2Q8N271 NAA40-205ENST00000539656 577 ntTSL 4 BASIC18.6■□□□□ 0.57
PROM2Q8N271 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
PROM2Q8N271 AC068987.2-201ENST00000565518 896 ntBASIC18.6■□□□□ 0.57
PROM2Q8N271 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PROM2Q8N271 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PROM2Q8N271 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC18.6■□□□□ 0.57
PROM2Q8N271 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.6■□□□□ 0.57
PROM2Q8N271 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.6■□□□□ 0.57
PROM2Q8N271 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.6■□□□□ 0.57
PROM2Q8N271 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.6■□□□□ 0.57
PROM2Q8N271 AC010491.1-201ENST00000563101 2797 ntBASIC18.6■□□□□ 0.57
PROM2Q8N271 LINC02199-201ENST00000506655 2702 ntBASIC18.6■□□□□ 0.57
PROM2Q8N271 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.6■□□□□ 0.57
PROM2Q8N271 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PROM2Q8N271 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PROM2Q8N271 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PROM2Q8N271 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PROM2Q8N271 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.6■□□□□ 0.57
PROM2Q8N271 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PROM2Q8N271 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PROM2Q8N271 AC024909.3-201ENST00000611513 2257 ntBASIC18.6■□□□□ 0.57
PROM2Q8N271 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.6■□□□□ 0.57
PROM2Q8N271 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PROM2Q8N271 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PROM2Q8N271 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.59■□□□□ 0.57
PROM2Q8N271 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 TEKT4P2-202ENST00000559466 1312 ntBASIC18.59■□□□□ 0.57
PROM2Q8N271 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.59■□□□□ 0.57
PROM2Q8N271 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PROM2Q8N271 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.59■□□□□ 0.57
PROM2Q8N271 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.59■□□□□ 0.57
PROM2Q8N271 ALG1L3P-201ENST00000503331 765 ntBASIC18.59■□□□□ 0.57
PROM2Q8N271 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC18.59■□□□□ 0.57
PROM2Q8N271 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC18.59■□□□□ 0.57
PROM2Q8N271 AL590396.2-201ENST00000636511 1041 ntBASIC18.59■□□□□ 0.57
PROM2Q8N271 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.59■□□□□ 0.57
PROM2Q8N271 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.59■□□□□ 0.57
PROM2Q8N271 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PROM2Q8N271 AL590440.2-201ENST00000641973 1595 ntBASIC18.59■□□□□ 0.57
PROM2Q8N271 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PROM2Q8N271 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.58■□□□□ 0.57
PROM2Q8N271 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PROM2Q8N271 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PROM2Q8N271 BRD7P5-201ENST00000299197 1822 ntBASIC18.58■□□□□ 0.57
PROM2Q8N271 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PROM2Q8N271 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PROM2Q8N271 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC18.58■□□□□ 0.57
PROM2Q8N271 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.58■□□□□ 0.57
PROM2Q8N271 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.58■□□□□ 0.57
PROM2Q8N271 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PROM2Q8N271 NHP2P1-201ENST00000335274 462 ntBASIC18.58■□□□□ 0.56
PROM2Q8N271 SNX15-201ENST00000352068 771 ntTSL 5 BASIC18.58■□□□□ 0.56
PROM2Q8N271 AC106827.1-201ENST00000366454 431 ntBASIC18.58■□□□□ 0.56
PROM2Q8N271 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PROM2Q8N271 SCARNA12-201ENST00000459155 270 ntBASIC18.58■□□□□ 0.56
PROM2Q8N271 AC006529.1-201ENST00000459978 637 ntBASIC18.58■□□□□ 0.56
PROM2Q8N271 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.58■□□□□ 0.56
PROM2Q8N271 RN7SL564P-201ENST00000496309 250 ntBASIC18.58■□□□□ 0.56
PROM2Q8N271 FOXN3-AS2-201ENST00000554071 1262 ntBASIC18.58■□□□□ 0.56
PROM2Q8N271 AC023968.2-201ENST00000560593 1049 ntBASIC18.58■□□□□ 0.56
PROM2Q8N271 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC18.58■□□□□ 0.56
PROM2Q8N271 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC18.58■□□□□ 0.56
PROM2Q8N271 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PROM2Q8N271 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
PROM2Q8N271 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PROM2Q8N271 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PROM2Q8N271 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PROM2Q8N271 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PROM2Q8N271 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PROM2Q8N271 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PROM2Q8N271 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms