Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 RPL5P21-201ENST00000404620 815 ntBASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 AC190387.1-201ENST00000551683 408 ntBASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 RRP7BP-205ENST00000566851 833 ntBASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 AC099568.2-201ENST00000609194 695 ntBASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 AC007431.3-201ENST00000623221 587 ntBASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 MST1P2-201ENST00000457982 2291 ntBASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFPL4BQ6ZWI9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 RN7SL399P-201ENST00000471648 279 ntBASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 AL049840.4-201ENST00000602422 811 ntBASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 AC093726.1-201ENST00000608064 963 ntBASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 KRT8P44-201ENST00000441609 1350 ntBASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RFPL4BQ6ZWI9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
RFPL4BQ6ZWI9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms