Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
ATP1B3P54709 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.95□□□□□ -0.34
ATP1B3P54709 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
ATP1B3P54709 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.95□□□□□ -0.34
ATP1B3P54709 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.95□□□□□ -0.34
ATP1B3P54709 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
ATP1B3P54709 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ATP1B3P54709 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.95□□□□□ -0.34
ATP1B3P54709 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.95□□□□□ -0.34
ATP1B3P54709 AC131212.3-201ENST00000624087 4219 ntBASIC12.95□□□□□ -0.34
ATP1B3P54709 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.95□□□□□ -0.34
ATP1B3P54709 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.95□□□□□ -0.34
ATP1B3P54709 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.95□□□□□ -0.34
ATP1B3P54709 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.95□□□□□ -0.34
ATP1B3P54709 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.95□□□□□ -0.34
ATP1B3P54709 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.95□□□□□ -0.34
ATP1B3P54709 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.95□□□□□ -0.34
ATP1B3P54709 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.95□□□□□ -0.34
ATP1B3P54709 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.95□□□□□ -0.34
ATP1B3P54709 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ATP1B3P54709 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.95□□□□□ -0.34
ATP1B3P54709 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.95□□□□□ -0.34
ATP1B3P54709 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 AC011474.4-201ENST00000623523 2076 ntBASIC12.95□□□□□ -0.34
ATP1B3P54709 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
ATP1B3P54709 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.95□□□□□ -0.34
ATP1B3P54709 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.95□□□□□ -0.34
ATP1B3P54709 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATP1B3P54709 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ATP1B3P54709 TCAF1P1-201ENST00000414990 2232 ntBASIC12.94□□□□□ -0.34
ATP1B3P54709 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.94□□□□□ -0.34
ATP1B3P54709 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.94□□□□□ -0.34
ATP1B3P54709 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ATP1B3P54709 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.94□□□□□ -0.34
ATP1B3P54709 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ATP1B3P54709 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ATP1B3P54709 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ATP1B3P54709 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ATP1B3P54709 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.94□□□□□ -0.34
ATP1B3P54709 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.94□□□□□ -0.34
ATP1B3P54709 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.94□□□□□ -0.34
ATP1B3P54709 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.94□□□□□ -0.34
ATP1B3P54709 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.94□□□□□ -0.34
ATP1B3P54709 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.94□□□□□ -0.34
ATP1B3P54709 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.94□□□□□ -0.34
ATP1B3P54709 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.94□□□□□ -0.34
ATP1B3P54709 AL662799.1-202ENST00000614205 422 ntBASIC12.94□□□□□ -0.34
ATP1B3P54709 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 AC007431.3-201ENST00000623221 587 ntBASIC12.94□□□□□ -0.34
ATP1B3P54709 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 AC027612.1-201ENST00000445234 2395 ntBASIC12.94□□□□□ -0.34
ATP1B3P54709 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms