Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.59□□□□□ -0.07
GTF2A1P52655 AL591684.3-201ENST00000605187 298 ntBASIC14.59□□□□□ -0.07
GTF2A1P52655 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.59□□□□□ -0.07
GTF2A1P52655 AL022326.1-202ENST00000641533 845 ntBASIC14.59□□□□□ -0.07
GTF2A1P52655 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.59□□□□□ -0.07
GTF2A1P52655 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 TCAM1P-207ENST00000485295 1537 ntBASIC14.59□□□□□ -0.07
GTF2A1P52655 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GTF2A1P52655 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
GTF2A1P52655 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC14.59□□□□□ -0.07
GTF2A1P52655 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
GTF2A1P52655 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.59□□□□□ -0.07
GTF2A1P52655 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GTF2A1P52655 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
GTF2A1P52655 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
GTF2A1P52655 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
GTF2A1P52655 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GTF2A1P52655 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.58□□□□□ -0.08
GTF2A1P52655 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GTF2A1P52655 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
GTF2A1P52655 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 AC090505.1-201ENST00000430515 1834 ntBASIC14.58□□□□□ -0.08
GTF2A1P52655 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.58□□□□□ -0.08
GTF2A1P52655 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.58□□□□□ -0.08
GTF2A1P52655 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
GTF2A1P52655 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.58□□□□□ -0.08
GTF2A1P52655 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.58□□□□□ -0.08
GTF2A1P52655 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.58□□□□□ -0.08
GTF2A1P52655 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GTF2A1P52655 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.58□□□□□ -0.08
GTF2A1P52655 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 AC132008.2-207ENST00000454517 770 ntBASIC14.58□□□□□ -0.08
GTF2A1P52655 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 AC091167.2-201ENST00000579581 588 ntBASIC14.58□□□□□ -0.08
GTF2A1P52655 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.58□□□□□ -0.08
GTF2A1P52655 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.58□□□□□ -0.08
GTF2A1P52655 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.58□□□□□ -0.08
GTF2A1P52655 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC14.58□□□□□ -0.08
GTF2A1P52655 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 AC005696.4-201ENST00000614400 3147 ntBASIC14.58□□□□□ -0.08
GTF2A1P52655 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GTF2A1P52655 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.58□□□□□ -0.08
GTF2A1P52655 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.58□□□□□ -0.08
GTF2A1P52655 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GTF2A1P52655 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 IYD-208ENST00000500320 2158 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.57□□□□□ -0.08
GTF2A1P52655 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.57□□□□□ -0.08
GTF2A1P52655 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
GTF2A1P52655 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms